GSABenchmark-package	GSABenchmark-package
accuracyBenchmark	accuracyBenchmark
accuracyBenchmarkMultiple	accuracyBenchmarkMultiple
addGlobalAverage	addGlobalAverage
addMethodInfo	addMethodInfo
addMetricSummary	addMetricSummary
addModuleScoreHelper	addModuleScoreHelper
aggregateRankPlot	aggregateRankPlot
aggregateRanks	aggregateRanks
alignmentScore	alignmentScore
allBenchmarkPlots	allBenchmarkPlots
allBenchmarkResults	allBenchmarkResults
allGeneSetRanks	allGeneSetRanks
allMetricRanks	allMetricRanks
allTopRatios	allTopRatios
benchmarkPlots	benchmarkPlots
benchmarkSummary	benchmarkSummary
binaryPredMetric	binaryPredMetric
binaryPredMetricCore	binaryPredMetricCore
bindSummary	bindSummary
boundaryBenchmark	boundaryBenchmark
boundaryBenchmarkMultiple	boundaryBenchmarkMultiple
boundaryMCCBenchmark	boundaryMCCBenchmark
computeBoundaryMetrics	computeBoundaryMetrics
computeGlobalMetrics	computeGlobalMetrics
computeMCC	computeMCC
computeMCCMetric	computeMCCMetric
computeMetricMeans	computeMetricMeans
corrPlots	corrPlots
corrSummary	corrSummary
directMCCBenchmark	directMCCBenchmark
directMCCBenchmarkMultiple	directMCCBenchmarkMultiple
efficiencyBenchmark	efficiencyBenchmark
extractCellScores	extractCellScores
geneSetRankPlots	geneSetRankPlots
geneSetRanks	geneSetRanks
globalBenchmark	globalBenchmark
globalBenchmarkMultiple	globalBenchmarkMultiple
globalBenchmarkSummary	globalBenchmarkSummary
GSABenchmark	GSABenchmark-package
mdsPlots	mdsPlots
mdsScoreSummary	mdsScoreSummary
memoryPlot	memoryPlot
metricRankPlots	metricRankPlots
metricRanks	metricRanks
plotList	plotList
predJaccardPlots	predJaccardPlots
predJaccards	predJaccards
ratioPlot	ratioPlot
runAddModuleScore	runAddModuleScore
runAUCell	runAUCell
runBenchmark	runBenchmark
runBenchmarkShuffle	runBenchmarkShuffle
runDecoupleRMethod	runDecoupleRMethod
runEscapeMethod	runEscapeMethod
runGSAMethods	runGSAMethods
runGSVA	runGSVA
runGSVAMethod	runGSVAMethod
runJASMINE	runJASMINE
runMDT	runMDT
runMethodShuffle	runMethodShuffle
runMLM	runMLM
runORA	runORA
runPagoda2	runPagoda2
runPLAGE	runPLAGE
runSingscore	runSingscore
runSiPSiC	runSiPSiC
runssGSEA	runssGSEA
runUCell	runUCell
runUDT	runUDT
runVAM	runVAM
runZscore	runZscore
scorePlot	scorePlot
supportedMethods	supportedMethods
timeExpr	timeExpr
timePlot	timePlot
