dnaEPICO-package	dnaEPICO
analyzeSvaEnmix	analyzeSvaEnmix
annotateMethylationGLMSummaries	annotateMethylationGLMSummaries
annotateMethylationLMESummaries	annotateMethylationLMESummaries
assessSamplesMinfiEwasWater	assessSamplesMinfiEwasWater
buildClockFoundationInputsPreprocessingPheno	buildClockFoundationInputsPreprocessingPheno
buildRawMinfiEwasWater	buildRawMinfiEwasWater
collectSignificantCpGsMethylationGLM	collectSignificantCpGsMethylationGLM
collectSignificantInteractionsMethylationLME	collectSignificantInteractionsMethylationLME
combineTimepointsPreprocessingPheno	combineTimepointsPreprocessingPheno
dnaEPICO	dnaEPICO
dnaEPICO_dnamReport	dnaEPICO_dnamReport-class
dnaEPICO_dnamReport-class	dnaEPICO_dnamReport-class
dnaEPICO_dnamReport_prepared	dnaEPICO_dnamReport_prepared-class
dnaEPICO_dnamReport_prepared-class	dnaEPICO_dnamReport_prepared-class
dnaEPICO_dnamReport_render	dnaEPICO_dnamReport_render-class
dnaEPICO_dnamReport_render-class	dnaEPICO_dnamReport_render-class
dnaEPICO_methylationGLM	dnaEPICO_methylationGLM-class
dnaEPICO_methylationGLM-class	dnaEPICO_methylationGLM-class
dnaEPICO_methylationLME	dnaEPICO_methylationLME-class
dnaEPICO_methylationLME-class	dnaEPICO_methylationLME-class
dnaEPICO_preprocessingMinfiEwasWater	dnaEPICO_preprocessingMinfiEwasWater-class
dnaEPICO_preprocessingMinfiEwasWater-class	dnaEPICO_preprocessingMinfiEwasWater-class
dnaEPICO_preprocessingPheno	dnaEPICO_preprocessingPheno-class
dnaEPICO_preprocessingPheno-class	dnaEPICO_preprocessingPheno-class
dnaEPICO_svaEnmix	dnaEPICO_svaEnmix-class
dnaEPICO_svaEnmix-class	dnaEPICO_svaEnmix-class
dnamReport	dnamReport
estimateLC	estimateLC
estimateLCMinfiEwasWater	estimateLCMinfiEwasWater
estimateSvaEnmixControls	estimateSvaEnmixControls
extractMake	extractMake
extractMetricsMinfiEwasWater	extractMetricsMinfiEwasWater
filterProbesMinfiEwasWater	filterProbesMinfiEwasWater
filterSamplesMinfiEwasWater	filterSamplesMinfiEwasWater
fitMethylationGLMModels	fitMethylationGLMModels
fitMethylationLMEModels	fitMethylationLMEModels
loadMetricsPreprocessingPheno	loadMetricsPreprocessingPheno
mergeSvaTargetsEnmix	mergeSvaTargetsEnmix
methylationGLM	methylationGLM
methylationLME	methylationLME
normalizeMinfiEwasWater	normalizeMinfiEwasWater
plotAssessmentMinfiEwasWater	plotAssessmentMinfiEwasWater
plotCtrlMinfiEwasWater	plotCtrlMinfiEwasWater
plotMethylationGLMDiagnostics	plotMethylationGLMDiagnostics
plotMethylationGLMDistributions	plotMethylationGLMDistributions
plotMethylationLMEDiagnostics	plotMethylationLMEDiagnostics
plotMetricsMinfiEwasWater	plotMetricsMinfiEwasWater
plotNormalizationMinfiEwasWater	plotNormalizationMinfiEwasWater
plotRawDensityMinfiEwasWater	plotRawDensityMinfiEwasWater
plotSexMinfiEwasWater	plotSexMinfiEwasWater
plotSvaEnmix	plotSvaEnmix
predictSexMinfiEwasWater	predictSexMinfiEwasWater
prepareDnamReportInputs	prepareDnamReportInputs
prepareMethylationGLMData	prepareMethylationGLMData
prepareMethylationLMEData	prepareMethylationLMEData
preprocessingMinfiEwasWater	preprocessingMinfiEwasWater
preprocessingPheno	preprocessingPheno
print.dnaEPICO_dnamReport	print.dnaEPICO_dnamReport
readPhenotypeTargets	readPhenotypeTargets
readRGSetMinfiEwasWater	readRGSetMinfiEwasWater
renderDnamReport	renderDnamReport
splitTimepointsPreprocessingPheno	splitTimepointsPreprocessingPheno
summarizeMethylationGLMModels	summarizeMethylationGLMModels
summarizeMethylationLMEModels	summarizeMethylationLMEModels
summarizeTimepointsMethylationLME	summarizeTimepointsMethylationLME
svaEnmix	svaEnmix
writeMethylationGLMOutputs	writeMethylationGLMOutputs
writeMethylationLMEOutputs	writeMethylationLMEOutputs
writePhenoLCMinfiEwasWater	writePhenoLCMinfiEwasWater
writePreprocessingPhenoOutputs	writePreprocessingPhenoOutputs
writeSvaEnmixOutputs	writeSvaEnmixOutputs
