Package: RedeR
Type: Package
Title: Interactive visualization and manipulation of nested networks
Version: 3.9.1
Authors@R: 
    c(person("Xin", "Wang", role = "ctb"),
      person("Florian", "Markowetz", role = "ctb"),
      person("Mauro", "Castro", role = c("aut", "cre"),
              email = "mauro.a.castro@gmail.com",
              comment = c(ORCID = "0000-0003-4942-8131")))
Depends: R (>= 4.4), methods
Imports: scales, igraph
Suggests: knitr, rmarkdown, BiocStyle, TreeAndLeaf
SystemRequirements: Java Runtime Environment (Java>= 11)
Description: RedeR combines an R package with a stand-alone Java application for interactive visualization and manipulation of nested networks. Graph, node, and edge attributes can be configured using either graphical or command-line methods, following igraph syntax rules.
License: GPL-3
biocViews: GUI, GraphAndNetwork, Network, NetworkEnrichment,
        NetworkInference, Software, SystemsBiology
VignetteBuilder: knitr
BugReports: https://github.com/sysbiolab/RedeR/issues
URL: https://doi.org/10.1186/gb-2012-13-4-r29
Collate: AllChecks.R AllValidations.R AllClasses.R AllGenerics.R
        internalLegendMethods.R internalOtherMethods.R
        exportedCallMethods.R exportedOtherMethods.R
        exportedAddGraphMethods.R exportedGetGraphMethods.R
        exportedRelaxMethods.R exportedNestMethods.R
        exportedAttributeSeters.R exportedWrappers.R Misc.R zzz.R
Encoding: UTF-8
Config/roxygen2/version: 8.0.0
git_url: https://git.bioconductor.org/packages/RedeR
git_branch: devel
git_last_commit: ce02271
git_last_commit_date: 2026-07-12
Repository: Bioconductor 3.24
Date/Publication: 2026-07-12
NeedsCompilation: no
Packaged: 2026-07-12 22:16:21 UTC; biocbuild
Author: Xin Wang [ctb],
  Florian Markowetz [ctb],
  Mauro Castro [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-4942-8131>)
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>
Built: R 4.6.1; ; 2026-07-13 05:43:31 UTC; unix
