ann2term                Annotate the pathways from a scores matrix
buildRefObject          Create a reference data object for input to the
                        pathMED functions
dissectDB               Split pathways into coexpressed subpathways
genesetsData            Preloaded gene sets
getScores               Calculate pathways scores for a dataset
mScores_createReference
                        Create a reference dataset based on M-scores
mScores_filterPaths     Filter pathways from the reference M-scores
                        dataset
mScores_imputeFromReference
                        Estimate M-scores for a dataset without healthy
                        controls
methodsML               Prepare the models parameter for the trainModel
                        function
pathMEDExampleData      Example of test gene expression data
pathMEDExampleMetadata
                        Metadata of test gene expression data
predictExternal         Predict conditions in external datasets
refData                 Example of reference gene expression datasets
trainModel              Train ML models and perform internal validation
