Package: ncGTW
Type: Package
Title: Alignment of LC-MS Profiles by Neighbor-wise Compound-specific
        Graphical Time Warping with Misalignment Detection
Version: 1.25.0
Author: Chiung-Ting Wu <ctwu@vt.edu>
Maintainer: Chiung-Ting Wu <ctwu@vt.edu>
biocViews: Software, MassSpectrometry, Metabolomics, Alignment
Description: The purpose of ncGTW is to help XCMS for LC-MS data
        alignment. Currently, ncGTW can detect the misaligned feature
        groups by XCMS, and the user can choose to realign these
        feature groups by ncGTW or not.
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
LinkingTo: Rcpp
Suggests: BiocStyle, knitr, testthat, rmarkdown
VignetteBuilder: knitr
Depends: methods, BiocParallel, xcms
Imports: Rcpp, grDevices, graphics, stats
BugReports: https://github.com/ChiungTingWu/ncGTW/issues
Config/pak/sysreqs: libglpk-dev make libicu-dev libxml2-dev
        libnetcdf-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:53:19 UTC
RemoteUrl: https://github.com/bioc/ncGTW
RemoteRef: HEAD
RemoteSha: b8d200e76e3aa18d9673e4c59d9058da6bc780b7
NeedsCompilation: yes
Packaged: 2025-11-02 15:17:01 UTC; root
Built: R 4.6.0; x86_64-w64-mingw32; 2025-11-02 15:20:07 UTC; windows
Archs: x64
