Package: mosaics
Type: Package
Title: MOSAiCS (MOdel-based one and two Sample Analysis and Inference
        for ChIP-Seq)
Version: 2.49.0
Depends: R (>= 3.0.0), methods, graphics, Rcpp
Imports: MASS, splines, lattice, IRanges, GenomicRanges,
        GenomicAlignments, Rsamtools, Seqinfo, S4Vectors
Suggests: mosaicsExample
Enhances: parallel
LinkingTo: Rcpp
SystemRequirements: Perl
Date: 2025-07-24
Author: Dongjun Chung, Pei Fen Kuan, Rene Welch, Sunduz Keles
Maintainer: Dongjun Chung <dongjun.chung@gmail.com>
Description: This package provides functions for fitting MOSAiCS and
        MOSAiCS-HMM, a statistical framework to analyze one-sample or
        two-sample ChIP-seq data of transcription factor binding and
        histone modification.
License: GPL (>= 2)
URL: http://groups.google.com/group/mosaics_user_group
LazyLoad: yes
biocViews: ChIPseq, Sequencing, Transcription, Genetics, Bioinformatics
Config/pak/sysreqs: libbz2-dev liblzma-dev perl xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:06:36 UTC
RemoteUrl: https://github.com/bioc/mosaics
RemoteRef: HEAD
RemoteSha: f190ca7939ec4b0b5cd1e0949b03abee5656c42b
NeedsCompilation: yes
Packaged: 2025-11-02 15:10:01 UTC; root
Built: R 4.6.0; x86_64-w64-mingw32; 2025-11-02 15:13:55 UTC; windows
Archs: x64
