# An integrated analysis package of Gene expression and Copy number alteration

## Documentation for package ‘iGC’ version 1.41.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

iGC-package | iGC: an integrated analysis package of gene expression and copy number alteration
create_gene_cna | Load and map CNA gain/loss onto human gene location by genome reference
create_gene_exp | Create an joint gene expression table of all samples
create_sample_desc | Create sample description table containing all required inputs
direct_gene_cna | Load the existed CNA gain/loss based on gene location.
find_cna_driven_gene | Perform an integrated analysis of gene expression (GE) and copy number alteration (CNA)
hg19DBNM | hg19-RefSeq
iGC | iGC: an integrated analysis package of gene expression and copy number alteration