Package: heatmaps
Title: Flexible Heatmaps for Functional Genomics and Sequence Features
Version: 1.35.0
Date: 2025-07-22
Author: Malcolm Perry <mgperry32@gmail.com>
Maintainer: Malcolm Perry <mgperry32@gmail.com>
Depends: R (>= 3.5.0)
Imports: methods, grDevices, graphics, stats, Biostrings,
        GenomicRanges, IRanges, KernSmooth, plotrix, Matrix, EBImage,
        RColorBrewer, BiocGenerics, Seqinfo
Suggests: BSgenome.Drerio.UCSC.danRer7, knitr, rmarkdown, testthat
biocViews: Visualization, SequenceMatching, FunctionalGenomics
License: Artistic-2.0
Description: This package provides functions for plotting heatmaps of
        genome-wide data across genomic intervals, such as ChIP-seq
        signals at peaks or across promoters. Many functions are also
        provided for investigating sequence features.
VignetteBuilder: knitr
Collate: Heatmap-class.R PlotHeatmap.R PlotHeatmapList.R
        PlotPatternDensityMap.R PWMScanHeatmap.R PatternHeatmap.R
        CoverageHeatmap.R SmoothHeatmap.R PlotHeatmapMeta.R Data.R
NeedsCompilation: no
RoxygenNote: 6.0.1
Config/pak/sysreqs: libfftw3-dev make libjpeg-dev libpng-dev
        libtiff-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:38:31 UTC
RemoteUrl: https://github.com/bioc/heatmaps
RemoteRef: HEAD
RemoteSha: dd77fbce2b16022f7025e2d3a56f26ff5e607092
Packaged: 2025-11-14 07:20:23 UTC; root
Built: R 4.6.0; ; 2025-11-14 07:24:36 UTC; windows
