Package: hdxmsqc
Type: Package
Title: An R package for quality Control for hydrogen deuterium exchange
        mass spectrometry experiments
Version: 1.7.0
Authors@R: c(person(family = "Crook", given = "Oliver M.",
		                email = "oliver.crook@stats.ox.ac.uk",
		                comment = c(ORCID = "0000-0001-5669-8506"),
		                role = c("aut", "cre")))
Description: The hdxmsqc package enables us to analyse and visualise
        the quality of HDX-MS experiments. Either as a final quality
        check before downstream analysis and publication or as part of
        a interative procedure to determine the quality of the data.
        The package builds on the QFeatures and Spectra packages to
        integrate with other mass-spectrometry data.
License: file LICENSE
Encoding: UTF-8
LazyData: false
Depends: R(>= 4.3), QFeatures, S4Vectors, Spectra
Imports: dplyr, tidyr, ggplot2, BiocStyle, knitr, methods, grDevices,
        stats, MsCoreUtils
Suggests: RColorBrewer, pheatmap, MASS, patchwork, testthat
VignetteBuilder: knitr
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.2.3
biocViews: QualityControl,DataImport, Proteomics, MassSpectrometry,
        Metabolomics
BugReports: https://github.com/ococrook/hdxmsqc/issues
URL: http://github.com/ococrook/hdxmsqc
Language: en-US
Config/pak/sysreqs: libglpk-dev make libicu-dev libxml2-dev libssl-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:29:31 UTC
RemoteUrl: https://github.com/bioc/hdxmsqc
RemoteRef: HEAD
RemoteSha: 1520631cd9363ed1759f98578beb821da1cfedd1
NeedsCompilation: no
Packaged: 2025-11-02 15:01:25 UTC; root
Author: Oliver M. Crook [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-5669-8506>)
Maintainer: Oliver M. Crook <oliver.crook@stats.ox.ac.uk>
Built: R 4.6.0; ; 2025-11-02 15:03:49 UTC; windows
