Package: ddCt
Title: The ddCt Algorithm for the Analysis of Quantitative Real-Time
        PCR (qRT-PCR)
Version: 1.67.0
Date: 2021-07-30
Author: Jitao David Zhang, Rudolf Biczok, and Markus Ruschhaupt
Description: The Delta-Delta-Ct (ddCt) Algorithm is an approximation
        method to determine relative gene expression with quantitative
        real-time PCR (qRT-PCR) experiments. Compared to other
        approaches, it requires no standard curve for each
        primer-target pair, therefore reducing the working load and yet
        returning accurate enough results as long as the assumptions of
        the amplification efficiency hold. The ddCt package implements
        a pipeline to collect, analyse and visualize qRT-PCR results,
        for example those from TaqMan SDM software, mainly using the
        ddCt method. The pipeline can be either invoked by a script in
        command-line or through the API consisting of S4-Classes,
        methods and functions.
Maintainer: Jitao David Zhang <jitao_david.zhang@roche.com>
biocViews: GeneExpression, DifferentialExpression,
        MicrotitrePlateAssay, qPCR
License: LGPL-3
Depends: R (>= 2.3.0), methods
Imports: Biobase (>= 1.10.0), RColorBrewer (>= 0.1-3), xtable, lattice,
        BiocGenerics
Collate: AllGlobals.R AllClasses.R AllGenerics.R AllFunctions.R
        AllMethods.R absoluteQ.R ddCtSplit.R output.R visualization.R
Suggests: testthat (>= 3.0.0), RUnit
Config/testthat/edition: 3
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:03:15 UTC
RemoteUrl: https://github.com/bioc/ddCt
RemoteRef: HEAD
RemoteSha: cd8a4fea64beedf0ecfffe3fad78471e0f2734e1
NeedsCompilation: no
Packaged: 2025-11-06 07:24:37 UTC; root
Built: R 4.6.0; ; 2025-11-06 07:25:57 UTC; windows
