Package: Scale4C
Type: Package
Title: Scale4C: an R/Bioconductor package for scale-space
        transformation of 4C-seq data
Version: 1.33.0
Date: 2025-06-27
Author: Carolin Walter
Maintainer: Carolin Walter <carolin.walter@uni-muenster.de>
Imports: methods, grDevices, graphics, utils
Depends: R (>= 3.5.0), smoothie, GenomicRanges, IRanges,
        SummarizedExperiment
Suggests:
Description: Scale4C is an R/Bioconductor package for scale-space
        transformation and visualization of 4C-seq data. The
        scale-space transformation is a multi-scale visualization
        technique to transform a 2D signal (e.g. 4C-seq reads on a
        genomic interval of choice) into a tesselation in the scale
        space (2D, genomic position x scale factor) by applying
        different smoothing kernels (Gauss, with increasing sigma).
        This transformation allows for explorative analysis and
        comparisons of the data's structure with other samples.
License: LGPL-3
biocViews: Visualization, QualityControl, DataImport, Sequencing,
        Coverage
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:39:01 UTC
RemoteUrl: https://github.com/bioc/Scale4C
RemoteRef: HEAD
RemoteSha: 72362051c4f60640ef49344e661ea754bf834555
NeedsCompilation: no
Packaged: 2025-10-30 10:28:19 UTC; root
Built: R 4.6.0; ; 2025-10-30 10:29:47 UTC; windows
