c3bde156c0761d9578badd79a0161031 *CITATION
125b8b49ce6590f85a32f0a18e47e14a *DESCRIPTION
79c58e2ad89d35e1a68916a9d5ba0b79 *INDEX
33b7b449313623da52b5caea94970c9e *Meta/Rd.rds
674521756dccec6132a948b197f05286 *Meta/data.rds
50a9fa3e1aa2c47fa7bdbd6e6bb8974e *Meta/features.rds
881f3e874d1c349c7b95dc9e463875ec *Meta/hsearch.rds
981c01e09fcdeb394f012b7e33c9e213 *Meta/links.rds
b2e962513a792fd2d520c3c1615cf71e *Meta/nsInfo.rds
249fcd6709c5541cbeb7f72db1544c17 *Meta/package.rds
18caafbb8298e2e89047e9b44dfa3da5 *Meta/vignette.rds
6621d5f58a1e621e537098fb6d553ebb *NAMESPACE
a0fddb94813c5ed2c6f607d24b436efd *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/SGSeq
5fcf6a637850ea8d38e4b08aec9d66cb *R/SGSeq.rdb
e790ea28899258f9482b8a113a5d82c2 *R/SGSeq.rdx
4d0a49da4a26ead3d0e3bde6dfb150dc *data/Rdata.rdb
7b8b72d85f3608141c4d68e091a6774b *data/Rdata.rds
77f6bd30e3da7dbf2ee1b07ed1e5381b *data/Rdata.rdx
4c5891cdcb837d077f12866293a11d85 *doc/SGSeq.R
a1bedcc062dbe7d53c768689aa8c88eb *doc/SGSeq.Rmd
6d39bd3e52877e5cc10a53908819d2f9 *doc/SGSeq.html
3495144e8ac278f1bc3d77dc699ff272 *doc/index.html
f635a290f6dd7bd6a571a748b9b4ce2d *extdata/bams/N1.bam
10e437ecd83a1648f6feb28efd666a3d *extdata/bams/N1.bam.bai
6ae387d023817532da8ab3273731c6b7 *extdata/bams/N2.bam
7bc7623be9eb5b52f7d272b1e54d7c1f *extdata/bams/N2.bam.bai
e07e5bf79859b2028cb402c079577316 *extdata/bams/N3.bam
20cd985ef7ffa218da184f187ce50dea *extdata/bams/N3.bam.bai
b0a8a2796e4cd67d1c5231481dc298f7 *extdata/bams/N4.bam
c14641aca82d7b303f9ab448ce5b4f2e *extdata/bams/N4.bam.bai
dab9dc6d74c1e618b960baa0148740af *extdata/bams/T1.bam
f1bd4bdf90f83ca520ab1fba63cea726 *extdata/bams/T1.bam.bai
6e43c101708a4040937e389b9888832b *extdata/bams/T2.bam
b48cfbe384de76d521dff37845bb811b *extdata/bams/T2.bam.bai
1751240dde82ab77847b18cc93ce4b31 *extdata/bams/T3.bam
b0c6a086071d7f7d5c5153cfc1778147 *extdata/bams/T3.bam.bai
0ed841f711101c6ed48133d5cf35c9df *extdata/bams/T4.bam
33e452914d0a92a7287b5902f7a223d3 *extdata/bams/T4.bam.bai
7d31b555fc3a0ef493db24637a69d7b5 *help/AnIndex
c5ac7927199450329cc375c55b5a5a28 *help/SGSeq.rdb
947cdcc0090344a88ca429f73cc110ea *help/SGSeq.rdx
4054df97c7c1abd686c23783798b55f7 *help/aliases.rds
e64c3a26559d66f2c5b9b30001b363c1 *help/paths.rds
7d1e04806c7f30c912378b251fae5577 *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
aa1cd7d5f49fc7a5ee7e2721a4654b39 *scripts/createExampleData.R
62e6eb32b9d91e2d2e22f8a0ebe3999b *unitTests/test_analyzeFeatures.R
41062843ebebbec77ddf6fbc1eebe14b *unitTests/test_analyzeVariants.R
1a72ecb53227d3f1a1b3ea90297e911f *unitTests/test_annotate.R
445456f7b917f405ff4ffa9c6f0c305a *unitTests/test_classes.R
fca7f739cb7036e0480477929e575cad *unitTests/test_convertToSGFeatures.R
008fcf1ee84836bd7c707d4e91053124 *unitTests/test_convertToTxFeatures.R
a3b06c1e5dab349b9a3fbacb6ade7563 *unitTests/test_findSGVariants.R
018d012a9bc57431328f9574ad429925 *unitTests/test_getBamInfo.R
49e19e07becae41efb382ed9f01719b2 *unitTests/test_getSGFeatureCounts.R
66d59bb78d566b15751680e3d3fa1c1d *unitTests/test_getSGVariantCounts.R
82ac16fa44fac098647f31ac89dfa696 *unitTests/test_mergeTxFeatures.R
9212fb3c627df1a8f0db8e52fa7b5da2 *unitTests/test_predictTxFeatures.R
e30149b56b868d0e555485ef0607eafb *unitTests/test_predictVariantEffects.R
