.generateBPParam        Utility function to generate BPPARAM object.
MoleculeExperiment-class
                        MoleculeExperiment class: An S4 class container
                        to store imaging-based spatial transcriptomics
                        data.
accessors               Accessor functions to work with
                        MoleculeExperiment objects
bufferBoundaries        Create a new boundaries assay with buffers
countMolecules          Count molecules per region of interest (e.g.,
                        cell)
dataframeToMEList       Convert a transcript (molecule) or boundary
                        dataframe to the ME list format
plotting-functions      Plotting functions for SpatialUtils
readBoundaries          Read in csv boundary information and convert to
                        ME list format.
readCosmx               Read in Cosmx data (Nanostring) as an ME
                        object.
readMerscope            Read in Merscope data to an ME object
readMolecules           Read in detected transcripts file/s into a
                        MoleculeExperiment object
readSegMask             Read a segmentation mask
readXenium              Read in Xenium data into a MoleculeExperiment
                        object
small_me                A subsetted Xenium dataset include for
                        demostration purposes.
subset_by_extent        Subset functions for MoleculeExperiment objects
summarization           Summarization methods to get insights into a
                        MoleculeExperiment object
