Package: CNAnorm
Version: 1.57.0
Date: 2012-08-06
Title: A normalization method for Copy Number Aberration in cancer
        samples
Author: Stefano Berri <sberri@illumina.com>, Henry M. Wood
        <H.M.Wood@leeds.ac.uk>, Arief Gusnanto <a.gusnanto@leeds.ac.uk>
Maintainer: Stefano Berri <sberri@illumina.com>
Depends: R (>= 2.10.1), methods
Description: Performs ratio, GC content correction and normalization of
        data obtained using low coverage (one read every 100-10,000 bp)
        high troughput sequencing. It performs a "discrete"
        normalization looking for the ploidy of the genome. It will
        also provide tumour content if at least two ploidy states can
        be found.
License: GPL-2
Imports: DNAcopy
Collate: AllGenerics.R AllClasses.R dataFrame2object.R
        workflowWrapper.R initialize-methods.R summary-methods.R
        smoothseg.R bandsegment.R mixtureModel.R normalize.R
        length-methods.R CNAnorm-accessors.R CNAnorm-methods.R
        Data-methods.R makeDefaultGraphParamteres.R
URL: http://www.r-project.org,
LazyLoad: yes
Packaged: 2025-11-02 03:33:32 UTC; root
biocViews: CopyNumberVariation, Sequencing, Coverage, Normalization,
        WholeGenome, DNASeq, GenomicVariation
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:09:07 UTC
RemoteUrl: https://github.com/bioc/CNAnorm
RemoteRef: HEAD
RemoteSha: e51424e1d4ea4eaa53d67bdf13b6863b6bf14a55
NeedsCompilation: yes
Built: R 4.6.0; x86_64-w64-mingw32; 2025-11-02 03:35:31 UTC; windows
Archs: x64
