Package: sketchR
Version: 1.7.0
Date: 2025-08-12
Title: An R interface for python subsampling/sketching algorithms
Authors@R: c(
    person("Charlotte", "Soneson", email = "charlottesoneson@gmail.com",
        role = c("aut", "cre"), comment = c(ORCID = "0000-0003-3833-2169")),
    person("Michael", "Stadler", email = "michael.stadler@fmi.ch",
           role = "aut", comment = c(ORCID = "0000-0002-2269-4934")),
    person("Friedrich Miescher Institute for Biomedical Research", 
           role = "cph"))
License: MIT + file LICENSE
Description: Provides an R interface for various subsampling algorithms
        implemented in python packages. Currently, interfaces to the
        geosketch and scSampler python packages are implemented. In
        addition it also provides diagnostic plots to evaluate the
        subsampling.
Imports: basilisk, Biobase, DelayedArray, dplyr, ggplot2, methods,
        reticulate, rlang, scales, stats
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), TENxPBMCData, scuttle,
        scran, scater, SingleR, celldex, cowplot, SummarizedExperiment,
        beachmat.hdf5, BiocStyle, BiocManager, SingleCellExperiment,
        snifter, uwot, bluster, class
URL: https://github.com/fmicompbio/sketchR
BugReports: https://github.com/fmicompbio/sketchR/issues
RoxygenNote: 7.3.2
Encoding: UTF-8
StagedInstall: no
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: SingleCell
Config/pak/sysreqs: libpng-dev python3 zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:28:06 UTC
RemoteUrl: https://github.com/bioc/sketchR
RemoteRef: HEAD
RemoteSha: 25a7083ed078bfee58213f3662facbbdf5f1052c
NeedsCompilation: no
Packaged: 2026-01-04 14:17:27 UTC; root
Author: Charlotte Soneson [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3833-2169>),
  Michael Stadler [aut] (ORCID: <https://orcid.org/0000-0002-2269-4934>),
  Friedrich Miescher Institute for Biomedical Research [cph]
Maintainer: Charlotte Soneson <charlottesoneson@gmail.com>
Built: R 4.6.0; ; 2026-01-04 14:21:45 UTC; unix
