% Bib
%%%%%%%%%%%%%%%%%%%%%%%%%%%

@article{martinezromero2018,
	title        = {Survival marker genes of colorectal cancer derived from consistent transcriptomic profiling},
	author       = {Jorge Martinez-Romero and Santiago Bueno-Fortes and Manuel Mart\'{i}n-Merino and Ana Ramirez De Molina and Javier {De Las Rivas}},
	year         = 2018,
	month        = 12,
	journal      = {BMC Genomics},
	publisher    = {BioMed Central Ltd.},
	volume       = 19,
	pages        = {45--60},
	doi          = {10.1186/S12864-018-5193-9},
	issn         = 14712164,
	url          = {https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-018-5193-9},
	issue        = 8,
	pmid         = 30537927
}

@article{BuenoFortes2023,
	title        = {Identification of a gene expression signature associated with breast cancer survival and risk that improves clinical genomic platforms},
	author       = {Santiago Bueno-Fortes and Alberto Berral-Gonzalez and Jos\'{e} Manuel S\'{a}nchez-Santos and Manuel Martin-Merino and Javier {De Las Rivas}},
	year         = 2023,
	month        = 1,
	journal      = {Bioinformatics Advances},
	publisher    = {Oxford Academic},
	volume       = 3,
	doi          = {10.1093/BIOADV/VBAD037},
	issn         = 26350041,
	url          = {https://dx.doi.org/10.1093/bioadv/vbad037},
	issue        = 1
}

@Manual{schwender2025siggenes,
  title        = {siggenes: Multiple Testing using SAM and Efron's Empirical Bayes Approaches},
  author       = {Holger Schwender},
  year         = {2025},
  note         = {R package version 1.82.0},
  doi          = {10.18129/B9.bioc.siggenes},
  url          = {https://bioconductor.org/packages/siggenes}
}

@article{fRMA,
    author = {McCall,MN and Bolstad,BM and Irizarry,RA},
    title = {Frozen robust multiarray analysis (fRMA)},
    journal = {Biostatistics},
    volume = {11},
    number = {2},
    year = {2010},
    pages = {242--253},
    publisher = {Biometrika Trust},
    doi={10.1093/biostatistics/kxp059},
}

@article{RMA,
  author={Gautier,L and Cope,L and Bolstad,BM and Irizarry,RA},
  title={affy---analysis of Affymetrix GeneChip data at the probe level},
  journal={Bioinformatics},
  volume={20},
  number={3},
  year={2004},
  issn={1367-4803},
  pages={307--315},
  doi={10.1093/bioinformatics/btg405},
  publisher={Oxford University Press},
  address={Oxford, UK},
}

@article{combat,
   Author="Kupfer, P and Guthke, R and Pohlers, D  and Huber,R and Koczan, D  and Kinne, RW",
   Title="{{B}atch correction of microarray data substantially improves the identification of genes differentially expressed in rheumatoid arthritis and osteoarthritis}",
   Journal="BMC Medical Genomics",
   Year="2012",
   Volume="5",
   Pages="23",
   doi={10.1186/1755-8794-5-23},
}

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