Package: RNAAgeCalc
Type: Package
Title: A multi-tissue transcriptional age calculator
Version: 1.23.0
Authors@R: c(
    person("Xu", "Ren", 
        email = "xuren2120@gmail.com", role = c("aut", "cre")),
    person("Pei Fen", "Kuan", 
        email = "peifen.kuan@stonybrook.edu", role = "aut"))
Description: It has been shown that both DNA methylation and RNA
        transcription are linked to chronological age and age related
        diseases. Several estimators have been developed to predict
        human aging from DNA level and RNA level. Most of the human
        transcriptional age predictor are based on microarray data and
        limited to only a few tissues. To date, transcriptional studies
        on aging using RNASeq data from different human tissues is
        limited. The aim of this package is to provide a tool for
        across-tissue and tissue-specific transcriptional age
        calculation based on GTEx RNASeq data.
License: GPL-2
URL: https://github.com/reese3928/RNAAgeCalc
BugReports: https://github.com/reese3928/RNAAgeCalc/issues
Encoding: UTF-8
Imports: ggplot2, recount, impute, AnnotationDbi, org.Hs.eg.db, stats,
        SummarizedExperiment, methods
Depends: R (>= 3.6)
Suggests: knitr, rmarkdown, testthat
RoxygenNote: 7.0.2
VignetteBuilder: knitr
biocViews: RNASeq,GeneExpression
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev libx11-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:57:30 UTC
RemoteUrl: https://github.com/bioc/RNAAgeCalc
RemoteRef: HEAD
RemoteSha: bb0872070930c8b0a094f7673927d5494cfddad7
NeedsCompilation: no
Packaged: 2026-01-22 19:53:24 UTC; root
Author: Xu Ren [aut, cre],
  Pei Fen Kuan [aut]
Maintainer: Xu Ren <xuren2120@gmail.com>
Built: R 4.6.0; ; 2026-01-22 20:19:51 UTC; unix
