Package: RITAN
Type: Package
Title: Rapid Integration of Term Annotation and Network resources
Version: 1.35.0
Authors@R: c(person("Michael", "Zimmermann", role = c("aut", "cre"),
                    email = "mtzimmermann@mcw.edu"))
Description: Tools for comprehensive gene set enrichment and extraction
        of multi-resource high confidence subnetworks. RITAN
        facilitates bioinformatic tasks for enabling network biology
        research.
LazyData: TRUE
Depends: R (>= 4.0),
Imports: graphics, methods, stats, utils, grid, gridExtra, reshape2,
        gplots, ggplot2, plotrix, RColorBrewer, STRINGdb, MCL,
        dynamicTreeCut, gsubfn, hash, png, sqldf, igraph, BgeeDB,
        knitr, RITANdata, GenomicFeatures, ensembldb, AnnotationFilter,
        EnsDb.Hsapiens.v86
VignetteBuilder: knitr
Collate: 'lib_enrichment.R' 'lib_network.R'
        'interconnectivity_functions.R'
RoxygenNote: 7.3.2
Suggests: rmarkdown, BgeeDB
License: file LICENSE
biocViews: QualityControl, Network, NetworkEnrichment,
        NetworkInference, GeneSetEnrichment, FunctionalGenomics,
        GraphAndNetwork
NeedsCompilation: no
Config/pak/sysreqs: libglpk-dev make libbz2-dev libicu-dev liblzma-dev
        libpng-dev libxml2-dev libssl-dev python3 xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:38:39 UTC
RemoteUrl: https://github.com/bioc/RITAN
RemoteRef: HEAD
RemoteSha: 487bbb97c7272de5164027f1bba745e5e090609f
Packaged: 2026-01-22 18:54:39 UTC; root
Author: Michael Zimmermann [aut, cre]
Maintainer: Michael Zimmermann <mtzimmermann@mcw.edu>
Built: R 4.6.0; ; 2026-01-22 19:07:09 UTC; unix
