# Convenient functions to streamline your single cell data analysis workflow

## Documentation for package ‘DOtools’ version 1.1.7

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

DO.Barplot | SEM Graph with wilcox test on single cell level
DO.BarplotClustert | SEM Graph with t test on cluster level
DO.BoxPlot | Box Graph with wilcox test on single cell level
DO.CellBender | DO.CellBender
DO.CellComposition | DO CellComposition
DO.CellTypist | DO Celltypist
DO.Correlation | DO Correlation Plot for visualizing similarity between categories
DO.DietSCE | Remove Layers from Seurat or SCE Object by Pattern
DO.Dotplot | DO Dot plot
DO.enrichR | DO.enrichR
DO.EvalIntegration | Do batch correction metrics for integration
DO.FullRecluster | DO.FullRecluster
DO.Heatmap | DO Heatmap of the mean expression of genes across a groups
DO.HeatmapFC | DO Heatmap of the mean expression of genes across a groups
DO.Import | DO.Import
DO.Integration | DO.Integration SCE object integration directly
DO.MultiDGE | DO.MultiDGE
DO.PyEnv | DO.PyEnv
DO.scVI | DO.scVI
DO.SplitBarGSEA | DO Bar plot for GSEA df result
DO.Subset | DO.Subset
DO.TransferLabel | DO.TransferLabel
DO.UMAP | DO.UMAP
DO.VlnPlot | Violin Graph with wilcox test on single cell level
DOtools | DOtools: A Toolkit for scRNA Data Analysis