BLOSUM62	BLOSUM62
CDR3ab	CDR3ab
class:clust_irr	clust_irr-class
clustirr	clustirr
clust_irr	clust_irr-class
clust_irr-class	clust_irr-class
D1	CDR3ab
D2	CDR3ab
dco	dco
decode_all_communities	decode_all_communities
decode_community	decode_community
detect_communities	detect_communities
get_ag_gene_hits	get_ag_gene_hits
get_ag_species_hits	get_ag_species_hits
get_beta_cprob_ag	get_beta_cprob_ag
get_beta_violin_ag	get_beta_violin_ag
get_cdr3_motifs	get_cdr3_motifs
get_clustirr_clust	clust_irr-class
get_clustirr_clust,clust_irr-method	clust_irr-class
get_clustirr_inputs	clust_irr-class
get_clustirr_inputs,clust_irr-method	clust_irr-class
get_community_feature_purity	get_community_feature_purity
get_community_feature_stats	get_community_feature_stats
get_cosine_similarity	get_cosine_similarity
get_honeycombs	get_honeycombs
get_nrads	get_nrads
mcpas	mcpas
plot_graph	plot_graph
save_interactive_graph	save_interactive_graph
tcr3d	tcr3d
vdjdb	vdjdb
