237b6518a5d69899745712d18be7568a7a7d90c5252cb0b90bfa7132fe0917e1 977 CITATION
7d4f8fe5d9987d8b11b41fc4ee5ab0a457868dbb8cbc6b50fbde2232e7e43c7c 2524 DESCRIPTION
9321a2e7e78294d5b68ec6f9a5c5984a2209721a0d02209913905dd90ce886d3 2854 INDEX
34145b8a2a52bbeaea45fbcf739e1326c2e59231098eeb0a2fd40249d554b6ef 3205 Meta/Rd.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
e608da14711af20e0c2fba4545387dee7ae9498f96bdb31f840ed7af4e4fa20d 2838 Meta/hsearch.rds
3b8aa36c1a27175456147fadf1a36710dcfe4a5df296bb6dd9d97b11e93a4b73 1310 Meta/links.rds
1ff4660a470a58b7d4c16405629f2b9191fc5a256514a6af8be63a1c1da11679 875 Meta/nsInfo.rds
1e9ea31ec577f2970123bccca4020870d50b10e3f4124a7cde93c6e224382270 2101 Meta/package.rds
31da94f1f9d1812e3fe173ddc7b4ffaa1bb6543c619ee8060908e6a6f5bf10d8 387 Meta/vignette.rds
67b92293fbd9dd5764e8da03ec28c47c4343d5bf0b902064eb8d5c56ab09ef3b 1982 NAMESPACE
4c6444b37454724c96e36e9e5596d97b35a76ac0aa32f9c4a9ddf452da74393d 901 NEWS
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/amplican
152eaf160832c2ffcf469ac66804f1e09affc279674a202db6280bcd1e436244 532026 R/amplican.rdb
86446e056866c1604473e2a393482ee8257483233594d20e3438c243eee24be9 3313 R/amplican.rdx
2163f09979639ef77bd6381ef94e3fb8d4815c171ac91bf7443921da33a8d8bc 2233 README.md
6494dff3d1589b8a8ce39f6774c45e838f71edeb87ac538b43f4b5d309ef374e 415 TODO
560653570df6b9f4b1327bb746c9cbfbcb5a26061e884b1e28a0e8d255fe4e39 4276 doc/amplicanFAQ.Rmd
d17a283c0a78a8100f133ea7d2895800b4cfeca82517087be60758f3503b632c 8732 doc/amplicanFAQ.html
a3dd1e7d246b282028aafe4d6d50c4e0822639337372c03919632a351af55577 2807 doc/amplicanOverview.R
d25b461eb1a62ddf2447b63120436f344d0a8705e53a0bcaccfbc0e95baaa078 15944 doc/amplicanOverview.Rmd
0739a855693f4e573b9a8b5c9a7fecc7daed18b1de2257b1fc4fbfcee59f02eb 430562 doc/amplicanOverview.html
3c89885115f03f96007df2026fadea598215cd4315c46dca2775912a5f59ed51 10063 doc/example_amplicon_report.R
a690205cbc3cd49a2df812d957d77dac854d35dcebf1c652a0d21afcee92b8a4 18683 doc/example_amplicon_report.Rmd
ac17ad096a34e91c8391fce750a98e539a1e06fe8ee56a266a1df2c399f7ffa0 2262442 doc/example_amplicon_report.html
3e15f6795c754c2edc145f31c459eadaeaffbaad781bf1a1a3130beda2b6d30b 5889 doc/example_barcode_report.R
1a236f34f655cdbe9dfa80be3f209e4083d4c26f1092eb949479aaeb60b41724 17324 doc/example_barcode_report.Rmd
cf1cc9a507a75a9aeb4616cf1785253c5b385264ee700b4b54b305a1555ad398 209731 doc/example_barcode_report.html
29c1f7b22ceff1dba8226fc89fbd24e24a995fad20fb476d633693b3f5c0821f 4760 doc/example_group_report.R
cf4c6deadc4f4f08bde191463225bb812c9a872c6f6e1e4111945778f395d8ef 15111 doc/example_group_report.Rmd
5ef0c5de1a57ce8970aec7ab940688577001fe9aca9b79b39878c8875d774465 507723 doc/example_group_report.html
1a2b08290b381142b6235fdfe649c6f19c62c4ab5efd2cae4bea3bf647db33dc 5492 doc/example_guide_report.R
f3fe0546b7f50d9060dcac5bced79c15d21aa5fa2484fc57fc28cda9b812ef97 15151 doc/example_guide_report.Rmd
d92e9a371b39ca8108e316d654f2744d7f0f58022c6d21b733b01fc99b2e3f04 621023 doc/example_guide_report.html
661c844091f91b8822dbad0c24ec9da77addf0e4e5572926d251ce0ed3a0cea8 8741 doc/example_id_report.R
ad2e63928960bd19f54f849b643dea96d6b346e973f540a41282bd4c9318d420 17127 doc/example_id_report.Rmd
3eaed29a5e386e06b3de48d6ad30670d838868b2dcd15af9a5d09f8c2cf6fc3a 1821609 doc/example_id_report.html
98da076defc5df1446a714dfed754efed80958eb19d55e87a4ffd5eb7ef244ef 9595 doc/example_index.R
2d5457ffd4648745cc9476e9e9d20295a8e10ad8a49d1309ee39a01f63ea5042 20785 doc/example_index.Rmd
bd29c16aca0fe0c87a7746dfbb42104265f6aa93d0ce8545fd3ab2f54d839755 444597 doc/example_index.html
d80f2dc38322c8b820d5dc4f30fa20dc22802cd805ecbff0502f95404d8137e5 4656 doc/index.html
1516318c71275c41b9ff6b590e7ae93c097f04c484256f752707867986f6ee5c 6819 extdata/R1_001.fastq
0367fe186579bf769974f0b6f3048d69095025697c58b12e47f7283f9f0f7f80 7816 extdata/R1_002.fastq
7e13fa0dcff2b812e5d29e8898ce5d1830bf6b78b8646054f742a8af101755a6 6819 extdata/R2_001.fastq
1e010f06de933904d662c6412f41fe5a8db6f09da9d1130b733a4caa73504e65 7984 extdata/R2_002.fastq
327b846db324d347584cebd932eca5e2de85dbafd48a308960ded7a8e35177ba 1888 extdata/config.csv
fc3ffdc40a6ed7c50dfbc2e060986fc4171451d3823cea63005ee2f37dd0b81b 1380 extdata/results/RunParameters.txt
87656335dc364c7adc5e6fe1ed65335bce6549d190b3ac05004af96a7d80ffbd 4826 extdata/results/alignments/events_filtered_shifted.csv
87656335dc364c7adc5e6fe1ed65335bce6549d190b3ac05004af96a7d80ffbd 4826 extdata/results/alignments/events_filtered_shifted_normalized.csv
a68d097c22d4ccf1a6b1e424b1b8361a20841737b34ef1c649c7865f711f50e2 941 extdata/results/alignments/experiment_data.rds
606dad9c6202b471a9e2faaf32a905e6dda5246c602df3df90ba41525d7cf0e8 4455 extdata/results/alignments/raw_events.csv
c0c6c58c9c98007460da3d7e3a982bfc5fd08b363a431cb8e111d97801fa9525 2776 extdata/results/alignments/temp/barcode_1_aln.rds
f979ffe5b77cd741db6d5b2ef6a290fb6cb8b580c2dd0ffea967f1642848273e 1778 extdata/results/alignments/temp/barcode_1_events.csv
e8ee690954b8bc6e5fb9f2555e684e03b414903621db40a0a2750210c6437ed7 2835 extdata/results/alignments/temp/barcode_2_aln.rds
183d24165631415b1ede291ed288178f44a7a6b325a6e5056857991eaa28d93a 2767 extdata/results/alignments/temp/barcode_2_events.csv
a1bc5fef165d35fa43ad00378e0309cae84cfc7e7fcefb6cfcbb3d33d7f4adba 1533 extdata/results/alignments/unassigned_reads.csv
972719439f9c64d2aa50dcbc9c7dba0d0404069ce250fb988fc7fd292045253e 212 extdata/results/barcode_reads_filters.csv
4c12eb9464aa34eb9a13b5a73fdee605a878703c4eeed0d0f573336f89e3bd3e 2617 extdata/results/config_summary.csv
6db3ab917ad73e26cd4fd9508e8175ddc57260b7265109c38e4fdfe52337b8ca 4197 help/AnIndex
92437b3c1f4c1e822a8135c1a86118081bcc36e214bd99909e2c95ce1bdb439c 977 help/aliases.rds
a509fea380b500219271e076ba00853ef32b76808b8d59b468f050ecd0260873 189312 help/amplican.rdb
2e6495a92d96a7c85294614b14c0fdb2e4fc2af83d4bdb185f97a2802041ffde 1818 help/amplican.rdx
c1bb89f57d15403c08b964285f3a6aa2200997317c07146637d7f992f3db6ad8 849 help/paths.rds
03543e75f4aae5c4a4ab596773cef6ded64c9f5fd650b2ce57eae74d009c0f2a 6246 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
c76a6194f3649540874e6ecc540696799dfb0a87ff793c15bc7b7cb12938d1f8 89704 libs/amplican.so
f104872d661a80f4b3d67263ef3fe684bb7001acddc05ec647c9c4f143abe555 5322 libs/symbols.rds
7eada85a67763df0af6d3ddbd659e16ef518f084ddeb985c02ea051d93de8018 18551 rmarkdown/templates/amplicon_report/skeleton/skeleton.Rmd
dcb02ba48ba3ff04f7852470d1d5dc8c81146cf6121c611c626f651fbffd9ea0 121 rmarkdown/templates/amplicon_report/template.yaml
e2a8a52a880caa8c67d4191b2ed460a58ada727a302487183256d4648b49417c 17193 rmarkdown/templates/barcode_report/skeleton/skeleton.Rmd
dcb1811b0d5ae893639dd561b9456265362097527bc7e803712d5346fdeb1363 110 rmarkdown/templates/barcode_report/template.yaml
196d8169568f6609465a6f5a3cbd70549f88a035c3bc688c174d8dc9a488d787 14982 rmarkdown/templates/group_report/skeleton/skeleton.Rmd
7767acafa00e5e0747159799e5d9ec03d71ea8eecc2fe831b0d4170f7106065f 137 rmarkdown/templates/group_report/template.yaml
41f7a673d1b1058652b578507c0548cc9184fc9c9603dfc18d30e42badf9dbd6 15022 rmarkdown/templates/guide_report/skeleton/skeleton.Rmd
8971a04e0c5e96086b9599b7f700e0dbac1de2e265f47f1d2f7da8d5fd32f8ec 118 rmarkdown/templates/guide_report/template.yaml
fc0b84863b38efd4a1a8c53d87e11710329bc0117b52a52a26ec5cb39d97b95e 17001 rmarkdown/templates/id_report/skeleton/skeleton.Rmd
2be240f4c11832aa52db8f603fa5ed8a2160795279cc9267f8abb36d1492d8c9 167 rmarkdown/templates/id_report/template.yaml
45f1f41e00c4fe9604b308984097553ce060e49c83e8735b581de973095f483c 20404 rmarkdown/templates/index_report/skeleton/skeleton.Rmd
af4d21e24f3ab735518d043b2afa1f54be10ac97c24788f956abb8d0e0b981bd 139 rmarkdown/templates/index_report/template.yaml
af1cc58383709fb82186012a3b9f31f080a009b995e4df753ea101406a940d0d 4172 test_data/test_aln.csv
85666dc677e6adba488748a854394ca74d63b511e4ad0cb93ad596d025ae5301 473 test_data/test_cfg.csv
