Package: ModCon
Type: Package
Title: Modifying splice site usage by changing the mRNP code, while
        maintaining the genetic code
Version: 1.20.0
Authors@R: person("Johannes", "Ptok", role = c("aut", "cre"), email = "Johannes.Ptok@posteo.de", comment = c(ORCID = "0000-0002-0322-5649"))
Description: Collection of functions to calculate a nucleotide sequence
        surrounding for splice donors sites to either activate or
        repress donor usage. The proposed alternative nucleotide
        sequence encodes the same amino acid and could be applied e.g.
        in reporter systems to silence or activate cryptic splice donor
        sites.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
VignetteBuilder: knitr
Depends: data.table, parallel, utils, stats, R (>= 4.1)
Suggests: testthat, knitr, rmarkdown, dplyr, shinycssloaders, shiny,
        shinyFiles, shinydashboard, shinyjs
SystemRequirements: Perl
biocViews: FunctionalGenomics, AlternativeSplicing
URL: https://github.com/caggtaagtat/ModCon
git_url: https://github.com/caggtaagtat/ModCon.git
Config/pak/sysreqs: perl
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 12:55:08 UTC
RemoteUrl: https://github.com/bioc/ModCon
RemoteRef: RELEASE_3_23
RemoteSha: 01aa2172111044d2052efb3e8690af6a740004a9
NeedsCompilation: no
Packaged: 2026-04-29 23:25:13 UTC; root
Author: Johannes Ptok [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-0322-5649>)
Maintainer: Johannes Ptok <Johannes.Ptok@posteo.de>
Built: R 4.6.0; ; 2026-04-30 00:46:15 UTC; unix
