Package: MSstatsResponse
Type: Package
Title: Statistical Methods for Chemoproteomics Dose-Response Analysis
Version: 1.2.0
Authors@R: c(
    person(
      "Sarah", "Szvetecz",
      email = "szvetecz.s@northeastern.edu",
      role = c("aut", "cre")), 
    person(
      "Tony", "Wu",
      email = "wu.anton@northeastern.edu",
      role = c("aut")),
    person(
      "Devon", "Kohler",
      email = "kohler.d@northeastern.edu",
      role = c("aut")),
    person(
      "Olga", "Vitek",
      email = "o.vitek@northeastern.edu",
      role = c("aut")))
Description: Tools for detecting drug-protein interactions and
        estimating IC50 values from chemoproteomics data. Implements
        semi-parametric isotonic regression, bootstrapping, and curve
        fitting to evaluate compound effects on protein abundance.
URL: https://github.com/Vitek-Lab/MSstatsResponse
BugReports: https://github.com/Vitek-Lab/MSstatsResponse/issues
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.5.0)
LazyData: false
RoxygenNote: 7.3.3
Imports: BiocParallel, ggplot2, dplyr, stats, parallel, data.table,
        tidyr, stringr, plotly, utils
Suggests: MSstats, MSstatsTMT, tidyverse, boot, purrr, gridExtra,
        knitr, rmarkdown, BiocStyle, testthat
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
biocViews: Proteomics, MassSpectrometry, StatisticalMethod, Software,
        Regression
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2026-04-28 13:05:49 UTC
RemoteUrl: https://github.com/bioc/MSstatsResponse
RemoteRef: RELEASE_3_23
RemoteSha: dcf6958d09309e719efea29d00309650aecbd07a
NeedsCompilation: no
Packaged: 2026-05-01 09:44:52 UTC; root
Author: Sarah Szvetecz [aut, cre],
  Tony Wu [aut],
  Devon Kohler [aut],
  Olga Vitek [aut]
Maintainer: Sarah Szvetecz <szvetecz.s@northeastern.edu>
Built: R 4.6.0; ; 2026-05-01 10:07:20 UTC; unix
