AIC_boxplots	AIC_boxplots
BatchQC	BatchQC
batchqc_explained_variation	batchqc_explained_variation
batch_correct	batch_correct
batch_design	batch_design
batch_indicator	batch_indicator
bisect	bisect
bladder_data_upload	bladder_data_upload
BMI_data	BMI_data
check_valid_input	check_valid_input
color_palette	color_palette
ComBat_correction	ComBat_correction
ComBat_seq_correction	ComBat_seq_correction
commentary	commentary
compute_aic	compute_aic
compute_lambda	compute_lambda
confound_metrics	confound_metrics
cor_props	cor_props
counts2pvalue	counts2pvalue
covariates_not_confounded	covariates_not_confounded
cramers_v	cramers_v
dendrogram_alpha_numeric_check	dendrogram_alpha_numeric_check
dendrogram_color_palette	dendrogram_color_palette
dendrogram_plotter	dendrogram_plotter
DESeq2_small_size	DESeq2_small_size
DESeq_large_analysis	DESeq_large_analysis
DE_analyze	DE_analyze
edgeR_large_analysis	edgeR_large_analysis
edgeR_small_size	edgeR_small_size
EV_plotter	EV_plotter
EV_table	EV_table
get.res	get.res
goodness_of_fit_nb	goodness_of_fit_nb
Harman_correction	harman_correction
heatmap_num_to_char_converter	heatmap_num_to_char_converter
heatmap_plotter	heatmap_plotter
is_design_balanced	is_design_balanced
kBET	kBET
limma_correction	limma_correction
merged_IDs	merged_IDs
nb_down_sample	nb_down_sample
nb_histogram	nb_histogram
nb_proportion	nb_proportion
normalize_SE	normalize_SE
PCA_plotter	PCA_plotter
permuted_DESeq	permuted_DESeq
permuted_edgeR	permuted_edgeR
plot_data	plot_data
plot_kBET	plot_kBET
possible_distances	possible_distances
possible_k_neighbors	possible_k_neighbors
preprocess	preprocess
process_dendrogram	process_dendrogram
protein_data	protein_data
protein_sample_info	protein_sample_info
pvalues_all_genes	pvalues_all_genes
pval_plotter	pval_plotter
pval_summary	pval_summary
ratio_plotter	ratio_plotter
run_AIC_models	run_AIC_models
run_kBET	run_kBET
run_lambda	run_lambda
signature_data	signature_data
std_pearson_corr_coef	std_pearson_corr_coef
summarized_experiment	summarized_experiment
summary_stats_EV_table	summary_stats_EV_table
svaseq_correction	svaseq_correction
sva_correction	sva_correction
tb_data_upload	tb_data_upload
umap	umap
variation_ratios	variation_ratios
volcano_plot	volcano_plot
