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# 0.1.0

- Published on github

# 0.1.1

 - Use regular rather than squared distances to calculate nearest neighbour PIs
 
# 0.99.0

 - Submission to BioConductor
 
# 0.99.4

 - Prediction of cell types
 
# 0.99.9

 - Prediction of cell types

# 0.99.9

 - Bugfixes in hyperframe building

# 0.99.10

 - Reducing computation time of the examples
 
# 0.99.17

 - Bugfix in calcnnPi

# 0.99.19

 - Shorter example times
 
# 0.99.20

 - Reducing running times of examples to pass R CMD CHECK
 
# 0.99.21

 - Bugfix in buildDataFrame
 
# 0.99.23

 - Added addNuclei() function for adding nuclei as spatstat::owin
 
# 0.99.24

 - Nuclei can be plotted using plotExplore()
 
# 0.99.25

 - ggplot2 objects are now returned for user customization
 - Repeated return() calls are omitted
 - NEWS file was updated to reflect all changes
 
# 0.99.26

 - Version bump with serial processing to find bug occurring only on server
 
# 0.99.30 

 - Reduce computation time of tests and vignettes in view of BioConductor server warnings
 - Automate choice of parallel backend for different operating systems in vignette
 
# 0.99.36

 - Simplify documentation and reducing example runtimes by pooling manpages using the rdname commend
 
# 0.99.39

 - Further round of reducing documentation and test time by pooling examples
 - Test windows on a single core
 
# 0.99.40

 - Use DOIs in URLs following winbuilder
 - Use makeCluster() on windows in the examples too
 
# 0.99.41

 - Clean up manpages for functions sharing the same example set

# 0.99.42

 - Reviewed all manpages, clarifying user options
 
# 0.99.43

 - Fixed bug on windows using bpnworkers()
 
# 0.99.44

 - Limit number of features to avoid windows timeout
 
# 1.1.1

 - Allow to pass own colours to plotExplore
 
# 1.1.2

 - Calculate nnPair PIs only between desired features
 
# 1.1.3

 - Some speedups in the buildDataFrame function
 - With reference to bioRxiv preprint
 
# 1.1.4

 - Optimize addWeightFunction

# 1.1.5

 - Export loadBalanceBplappy for use in other packages
 - Mention Bioconductor installer in README
 
# 1.1.6

 - Removing functionality related to Moran's I
 - Speed up and reduce memory requirements of linear (mixed) model fitting by preparing design matrices only once 
 - Correct bug in weighting for cell-wise nn distributions
 
# 1.1.7

 - Remove memory intensive looping over features in data preparation for mixed-effect modelling
 - Depend on Rfast package for fast rowsorting
 - Include tikzpicture as schematic overview in readme
 
# 1.1.8

 - Export some convenience functions for other packages
 
# 1.1.9

 - Added citation file to refer to the preprint directly
 - Make sure vignettes are build upon installation and mentioned in readme
 
# 1.1.10

 - Allow addition of scale bars in plotExplore and plotCells
 
# 1.3.1

 - Anticipate coming changes to lme4