# Import Visium data from the 10X Space Ranger pipeline

## Documentation for package ‘VisiumIO’ version 1.7.6

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

.TENxGeoJSON | Import 10X Genomics GeoJSON files
.TENxMappingParquet | Represent and import Parquet data from 10X Genomics
.TENxParquet | Represent and import Parquet data from 10X Genomics
.TENxSpatialCSV | Represent and import spatial CSV data from 10X Genomics
.TENxSpatialList | A class to represent and import spatial Visium data
.TENxSpatialParquet | Represent and import spatial Parquet data from 10X Genomics
.TENxVisium | A class to represent and import a single Visium Sample
.TENxVisiumHD | A class to represent and import multiple Visium HD samples
.TENxVisiumList | A class to represent and import multiple Visium samples
compareBarcodes | Compare barcodes between raw and filtered data
import-method | Import 10X Genomics GeoJSON files
import-method | Represent and import Parquet data from 10X Genomics
import-method | Represent and import spatial CSV data from 10X Genomics
import-method | A class to represent and import spatial Visium data
import-method | Represent and import spatial Parquet data from 10X Genomics
import-method | A class to represent and import a single Visium Sample
import-method | A class to represent and import multiple Visium HD samples
import-method | A class to represent and import multiple Visium samples
st_invert_y | Flip the Y-axis of cell or nucleus segmentations to align with H&E image
TENxGeoJSON | Import 10X Genomics GeoJSON files
TENxGeoJSON-class | Import 10X Genomics GeoJSON files
TENxMappingParquet | Represent and import Parquet data from 10X Genomics
TENxMappingParquet-class | Represent and import Parquet data from 10X Genomics
TENxParquet | Represent and import Parquet data from 10X Genomics
TENxParquet-class | Represent and import Parquet data from 10X Genomics
TENxSpatialCSV | Represent and import spatial CSV data from 10X Genomics
TENxSpatialCSV-class | Represent and import spatial CSV data from 10X Genomics
TENxSpatialList | A class to represent and import spatial Visium data
TENxSpatialList-class | A class to represent and import spatial Visium data
TENxSpatialParquet | Represent and import spatial Parquet data from 10X Genomics
TENxSpatialParquet-class | Represent and import spatial Parquet data from 10X Genomics
TENxVisium | A class to represent and import a single Visium Sample
TENxVisium-class | A class to represent and import a single Visium Sample
TENxVisiumHD | A class to represent and import multiple Visium HD samples
TENxVisiumHD-class | A class to represent and import multiple Visium HD samples
TENxVisiumList | A class to represent and import multiple Visium samples
TENxVisiumList-class | A class to represent and import multiple Visium samples