# Analysis of OpenArray PCR Data

## Documentation for package ‘OAtools’ version 0.99.9

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

.runFitCurve | Run the fit_curve() function
computeModels | Optimize 5PL models to OpenArray PCR data and save as metadata
determinePCRResults | Determine PCR results from features of multicomponent fluorescence curves
example_se | Example OpenArray Gene Expression Data Contained in a SummarizedExperiment
excelToSE | Convert OpenArray data from Excel to a Summarized Experiment
generateReport | Generate a PCR Report
oa_gene_expression_1 | Example Raw OpenArray Gene Expression Data
oa_gene_expression_2 | Example Raw OpenArray Gene Expression Data
plotCrt | Plot Relative Cycle Threshold Values by Gene
plotModel | Plot Fluorescence Values Predicted by Model
plotOverview | Plot Amplification Status by Sample and Gene
plotQC | Plot a 3D Quality Control Graphic from a SummarizedExperiment
seToQPCRBatch | Convert to qPCRBatch Object
target_threshold_key | Target Threshold Key