Package: scReClassify
Type: Package
Title: scReClassify: post hoc cell type classification of single-cell
        RNA-seq data
Version: 1.16.0
Authors@R: c(
    person("Pengyi", "Yang", email = "pengyi.yang@sydney.edu.au", 
    role = c("aut"), comment = c(ORCID = "0000-0003-1098-3138")),
    person("Taiyun", "Kim", email = "taiyun.kim91@gmail.com", 
    role = c("aut", "cre"), comment = c(ORCID = "0000-0002-5028-836X")))
Description: A post hoc cell type classification tool to fine-tune cell
        type annotations generated by any cell type classification
        procedure with semi-supervised learning algorithm AdaSampling
        technique. The current version of scReClassify supports Support
        Vector Machine and Random Forest as a base classifier.
License: GPL-3 + file LICENSE
BugReports: https://github.com/SydneyBioX/scReClassify/issues
URL: https://github.com/SydneyBioX/scReClassify,
        http://www.bioconductor.org/packages/release/bioc/html/scReClassify.html
Depends: R (>= 4.1)
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.2.1
Roxygen: list(markdown = TRUE)
Imports: randomForest, e1071, stats, SummarizedExperiment,
        SingleCellExperiment, methods
VignetteBuilder: knitr
biocViews: Software, Transcriptomics, SingleCell, Classification,
        SupportVectorMachine
Suggests: testthat, knitr, BiocStyle, rmarkdown, DT, mclust, dplyr
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:12:04 UTC
RemoteUrl: https://github.com/bioc/scReClassify
RemoteRef: RELEASE_3_22
RemoteSha: d6212d3491c447d86e295de0948e68177b1e3735
NeedsCompilation: no
Packaged: 2025-11-15 07:34:43 UTC; root
Author: Pengyi Yang [aut] (ORCID: <https://orcid.org/0000-0003-1098-3138>),
  Taiyun Kim [aut, cre] (ORCID: <https://orcid.org/0000-0002-5028-836X>)
Maintainer: Taiyun Kim <taiyun.kim91@gmail.com>
Built: R 4.5.2; ; 2025-11-15 07:37:20 UTC; windows
