Package: scDotPlot
Title: Cluster a Single-cell RNA-seq Dot Plot
Version: 1.4.0
Authors@R: c(
    person(given = c("Benjamin", "I"),
           family = "Laufer",
           role = c("aut", "cre"),
           email = "blaufer@gmail.com"),
    person(given = c("Brad", "A"),
           family = "Friedman",
           role = c("aut")))
Description: Dot plots of single-cell RNA-seq data allow for an
        examination of the relationships between cell groupings (e.g.
        clusters) and marker gene expression. The scDotPlot package
        offers a unified approach to perform a hierarchical clustering
        analysis and add annotations to the columns and/or rows of a
        scRNA-seq dot plot. It works with SingleCellExperiment and
        Seurat objects as well as data frames.
License: Artistic-2.0
URL: https://github.com/ben-laufer/scDotPlot
BugReports: https://github.com/ben-laufer/scDotPlot/issues
biocViews: Software, Visualization, DifferentialExpression,
        GeneExpression, Transcription, RNASeq, SingleCell, Sequencing,
        Clustering
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.4.0)
Imports: aplot, BiocGenerics, cli, dplyr, ggplot2, ggsci, ggtree,
        grDevices, magrittr, purrr, rlang, scales, scater, Seurat,
        SingleCellExperiment, stats, stringr, tibble, tidyr
Suggests: AnnotationDbi, BiocStyle, knitr, rmarkdown, scran, scRNAseq,
        scuttle, SeuratObject, testthat, vdiffr
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: libcairo2-dev libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libglpk-dev make libharfbuzz-dev libicu-dev
        libjpeg-dev libpng-dev libtiff-dev libwebp-dev libxml2-dev
        libssl-dev python3 zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:30:47 UTC
RemoteUrl: https://github.com/bioc/scDotPlot
RemoteRef: RELEASE_3_22
RemoteSha: 7ef0aa1e563d0bf36490da3f3a34d410e96c5673
NeedsCompilation: no
Packaged: 2025-11-11 17:27:26 UTC; root
Author: Benjamin I Laufer [aut, cre],
  Brad A Friedman [aut]
Maintainer: Benjamin I Laufer <blaufer@gmail.com>
Built: R 4.5.2; ; 2025-11-11 17:33:32 UTC; windows
