Package: procoil
Type: Package
Title: Prediction of Oligomerization of Coiled Coil Proteins
Version: 2.38.0
Date: 2025-09-19
Depends: R (>= 3.3.0), kebabs
Imports: methods, stats, graphics, S4Vectors, Biostrings, utils
Suggests: knitr
Authors@R: c(person(given = "Ulrich",
                    family = "Bodenhofer",
                    role = c("aut", "cre"),
                    email = "ulrich@bodenhofer.com"))
Maintainer: Ulrich Bodenhofer <ulrich@bodenhofer.com>
Description: The package allows for predicting whether a coiled coil
        sequence (amino acid sequence plus heptad register) is more
        likely to form a dimer or more likely to form a trimer.
        Additionally to the prediction itself, a prediction profile is
        computed which allows for determining the strengths to which
        the individual residues are indicative for either class.
        Prediction profiles can also be visualized as curves or
        heatmaps.
License: GPL (>= 2)
Collate: AllClasses.R access-methods.R show-methods.R plot-methods.R
        predict-methods.R weights-methods.R profile-methods.R
        readCCModel.R writeCCModel.R fitted-methods.R heatmap-methods.R
URL: https://github.com/UBod/procoil
VignetteBuilder: knitr
LazyLoad: yes
LazyData: yes
biocViews: Proteomics, Classification, SupportVectorMachine
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:06:44 UTC
RemoteUrl: https://github.com/bioc/procoil
RemoteRef: RELEASE_3_22
RemoteSha: e9b34f9a1f940790a991b01ea263f3e7a6d0a457
NeedsCompilation: no
Packaged: 2025-11-13 07:39:56 UTC; root
Author: Ulrich Bodenhofer [aut, cre]
Built: R 4.5.2; ; 2025-11-13 07:41:24 UTC; windows
