Package: motifStack
Type: Package
Version: 1.54.0
Title: Plot stacked logos for single or multiple DNA, RNA and amino
        acid sequence
Authors@R: c(person(given="Jianhong", family="Ou", email="jou@morgridge.org", 
        role=c("aut", "cre"), comment=c(ORCID="0000-0002-8652-2488")), 
        person(given="Michael", family="Brodsky", role = "ctb", 
        email = "Michael.Brodsky@umassmed.edu"), 
        person(given="Scot", family="Wolfe", role = "ctb", 
        email = "Scot.Wolfe@umassmed.edu"),
        person("Lihua Julie Zhu", "Developer", role = "aut",
        email = "Julie.Zhu@umassmed.edu"))
Author: Jianhong Ou, Michael Brodsky, Scot Wolfe and Lihua Julie Zhu
Maintainer: Jianhong Ou <jou@morgridge.org>
Depends: R (>= 2.15.1), methods, grid
Imports: ade4, Biostrings, ggplot2, grDevices, graphics, htmlwidgets,
        stats, stats4, utils, XML, TFBSTools
Suggests: Cairo, grImport, grImport2, BiocGenerics, MotifDb,
        RColorBrewer, BiocStyle, knitr, RUnit, rmarkdown, JASPAR2020
biocViews: SequenceMatching, Visualization, Sequencing, Microarray,
        Alignment, ChIPchip, ChIPSeq, MotifAnnotation, DataImport
Description: The motifStack package is designed for graphic
        representation of multiple motifs with different similarity
        scores. It works with both DNA/RNA sequence motif and amino
        acid sequence motif. In addition, it provides the flexibility
        for users to customize the graphic parameters such as the font
        type and symbol colors.
License: GPL (>= 2)
Lazyload: yes
VignetteBuilder: knitr
RoxygenNote: 7.3.3
Encoding: UTF-8
Config/pak/sysreqs: make libgsl0-dev libbz2-dev liblzma-dev libxml2-dev
        libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:12:08 UTC
RemoteUrl: https://github.com/bioc/motifStack
RemoteRef: RELEASE_3_22
RemoteSha: 6d8937d0e8183035d2209757a6ac58d3a668ebc3
NeedsCompilation: no
Packaged: 2025-11-11 15:51:49 UTC; root
Built: R 4.5.2; ; 2025-11-11 16:00:37 UTC; windows
