Package: iModMix
Title: Integrative Modules for Multi-Omics Data
Version: 1.0.0
Authors@R: c(
    person(given = "Isis",
           family = "Narvaez-Bandera",
           role = c("aut", "cre"),
           email = "isis.narvaez@upr.edu",
           comment = c(ORCID = "0000-0001-7320-618X")))
Description: The iModMix network-based method offers an integrated
        framework for analyzing multi-omics data, including
        metabolomics, proteomics, and transcriptomics data, enabling
        the exploration of intricate molecular associations within
        heterogeneous biological systems.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.3.3
biocViews: Software, Network, Clustering, Visualization,
        Transcriptomics, Proteomics, Metabolomics, GeneExpression,
        PrincipalComponent
URL: https://github.com/biodatalab/iModMix
BugReports: https://github.com/biodatalab/iModMix/issues
Depends: R (>= 4.4.0)
Imports: config (>= 0.3.2), golem (>= 0.4.1), shiny (>= 1.7.5),
        ComplexHeatmap, DT, RColorBrewer, WGCNA, corrplot, cowplot,
        dynamicTreeCut, ggplot2, glassoFast, impute, purrr, stringr,
        tidyr, visNetwork, shinyBS, httr, dplyr, stats, iModMixData,
        SummarizedExperiment, ExperimentHub (>= 2.99.0)
Suggests: testthat (>= 3.0.0), ggfortify, shinyWidgets, pROC, tuneR,
        knitr, curl, readxl, reshape2, vroom, here, enrichR, rmarkdown
Config/testthat/edition: 3
VignetteBuilder: knitr
Config/pak/sysreqs: make libicu-dev libpng-dev libssl-dev perl
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:38:57 UTC
RemoteUrl: https://github.com/bioc/iModMix
RemoteRef: RELEASE_3_22
RemoteSha: f1207f891a2798910f9e7d616aba91f40b47d316
NeedsCompilation: no
Packaged: 2025-11-11 15:04:11 UTC; root
Author: Isis Narvaez-Bandera [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7320-618X>)
Maintainer: Isis Narvaez-Bandera <isis.narvaez@upr.edu>
Built: R 4.5.2; ; 2025-11-11 15:08:13 UTC; windows
