Package: epiNEM
Type: Package
Title: epiNEM
Version: 1.34.0
Authors@R: c(person("Martin", "Pirkl",
    email = "martinpirkl@yahoo.de",
    role = c("aut", "cre")),
    person("Madeline", "Diekmann",
    role = c("aut")))
Author: Madeline Diekmann & Martin Pirkl
Maintainer: Martin Pirkl <martinpirkl@yahoo.de>
Description: epiNEM is an extension of the original Nested Effects
        Models (NEM). EpiNEM is able to take into account double
        knockouts and infer more complex network signalling pathways.
        It is tailored towards large scale double knock-out screens.
Depends: R (>= 4.1)
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: Pathways, SystemsBiology, NetworkInference, Network
RoxygenNote: 7.3.1
Imports: BoutrosLab.plotting.general, BoolNet, e1071, gtools, stats,
        igraph, utils, lattice, latticeExtra, RColorBrewer, pcalg,
        minet, grDevices, graph, mnem, latex2exp
VignetteBuilder: knitr
Suggests: knitr, RUnit, BiocGenerics, STRINGdb, devtools, rmarkdown,
        GOSemSim, AnnotationHub, org.Sc.sgd.db, BiocStyle
BugReports: https://github.com/cbg-ethz/epiNEM/issues
URL: https://github.com/cbg-ethz/epiNEM/
Config/pak/sysreqs: libglpk-dev libicu-dev libjpeg-dev libpng-dev
        libxml2-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:37:16 UTC
RemoteUrl: https://github.com/bioc/epiNEM
RemoteRef: RELEASE_3_22
RemoteSha: fb480466bced97eecd40359649f26ac9dd6b429c
NeedsCompilation: no
Packaged: 2025-11-12 07:47:24 UTC; root
Built: R 4.5.2; ; 2025-11-12 07:49:56 UTC; windows
