Package: biomvRCNS
Type: Package
Title: Copy Number study and Segmentation for multivariate biological
        data
Version: 1.50.0
Date: 2021-11-20
Author: Yang Du
Maintainer: Yang Du <tooyoung@gmail.com>
Description: In this package, a Hidden Semi Markov Model (HSMM) and one
        homogeneous segmentation model are designed and implemented for
        segmentation genomic data, with the aim of assisting in
        transcripts detection using high throughput technology like
        RNA-seq or tiling array, and copy number analysis using aCGH or
        sequencing.
License: GPL (>= 2)
LazyLoad: yes
Imports: methods, mvtnorm
Depends: IRanges, GenomicRanges, Gviz
Suggests: cluster, parallel, GenomicFeatures, dynamicTreeCut,
        Rsamtools, TxDb.Hsapiens.UCSC.hg19.knownGene
biocViews: aCGH, CopyNumberVariation, Microarray, Sequencing,
        Visualization, Genetics
Config/pak/sysreqs: make libbz2-dev libicu-dev libjpeg-dev liblzma-dev
        libpng-dev libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:26:56 UTC
RemoteUrl: https://github.com/bioc/biomvRCNS
RemoteRef: RELEASE_3_22
RemoteSha: c716e09df6fa9707e9460bae50d2d670ecfa9ec4
NeedsCompilation: yes
Packaged: 2025-11-11 14:17:56 UTC; root
Built: R 4.5.2; x86_64-w64-mingw32; 2025-11-11 14:26:08 UTC; windows
Archs: x64
