Package: attract
Type: Package
Title: Methods to Find the Gene Expression Modules that Represent the
        Drivers of Kauffman's Attractor Landscape
Version: 1.62.0
Date: 2018-06-29
Author: Jessica Mar
Maintainer: Samuel Zimmerman <samuel.e.zimmerman@gmail.com>
Description: This package contains the functions to find the gene
        expression modules that represent the drivers of Kauffman's
        attractor landscape. The modules are the core attractor
        pathways that discriminate between different cell types of
        groups of interest. Each pathway has a set of synexpression
        groups, which show transcriptionally-coordinated changes in
        gene expression.
License: LGPL (>= 2.0)
Collate: classdef.R findAttractorsStep.R removeFlatGenesStep.R
        findSynexprsStep.R findFuncEnrichAndCorr.R
Depends: R (>= 3.4.0), AnnotationDbi
Imports: Biobase, limma, cluster, GOstats, graphics, stats,
        reactome.db, KEGGREST, org.Hs.eg.db, utils, methods
Suggests: illuminaHumanv1.db
biocViews: ImmunoOncology, KEGG, Reactome, GeneExpression, Pathways,
        GeneSetEnrichment, Microarray, RNASeq
NeedsCompilation: no
Packaged: 2025-11-11 15:36:05 UTC; root
Config/pak/sysreqs: make libpng-dev libxml2-dev libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:05:14 UTC
RemoteUrl: https://github.com/bioc/attract
RemoteRef: RELEASE_3_22
RemoteSha: c4f9ff4957284b15e5f6cba6d2ba0e3bb1315348
Built: R 4.5.2; ; 2025-11-11 15:40:07 UTC; windows
