# Removes unwanted covariance from mass cytometry data

## Documentation for package ‘RUCova’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

calc_mean_BC | Calculated mean of normalised highest BC per cell
calc_mean_DNA | Calculated mean of normalised Iridium isotopes
compare_corr | Get pearson correlation coefficients between markers on a double triangular matrix for comparison (lower triangle: before RUCova, upper triangle: after RUCova). If RUCova has not been applied, the output is a symmetric matrix
heatmap_compare_corr | Plot pearson correlation coefficients between markers on a double triangular heatmap (lower triangle: before RUCova, upper triangle: after RUCova). If RUCova has not been applied, the output is a symmetric heatmap.
HNSCC_data | HNSCC data set
rucova | Remove unwanted covariance
sce | SingleCellExperiment Object with HNSCC Data Set