Package: LinkHD
Type: Package
Title: LinkHD: a versatile framework to explore and integrate
        heterogeneous data
Version: 1.24.0
Author: Laura M. Zingaretti [aut, cre]
Maintainer: "Laura M Zingaretti" <m.lau.zingaretti@gmail.com>
Imports: scales, cluster, graphics, ggpubr, gridExtra, vegan, rio,
        MultiAssayExperiment, emmeans, reshape2, data.table
Depends: R(>= 3.6.0), methods, ggplot2, stats
VignetteBuilder: knitr
Suggests: MASS (>= 7.3.0), knitr, rmarkdown, BiocStyle
biocViews: Classification,MultipleComparison,Regression,Software
output: BiocStyle::html_document
vignette: > %\VignetteIndexEntry{LinkHD:Multiple Heterogeneous
        (communities) Data Integration }
        %\VignetteEngine{knitr::rmarkdown} \usepackage[utf8]{inputenc}
Description: Here we present Link-HD, an approach to integrate
        heterogeneous datasets, as a generalization of STATIS-ACT
        (“Structuration des Tableaux A Trois Indices de la
        Statistique–Analyse Conjointe de Tableaux”), a family of
        methods to join and compare information from multiple
        subspaces. However, STATIS-ACT has some drawbacks since it only
        allows continuous data and it is unable to establish
        relationships between samples and features. In order to tackle
        these constraints, we incorporate multiple distance options and
        a linear regression based Biplot model in order to stablish
        relationships between observations and variable and perform
        variable selection.
License: GPL-3
Encoding: UTF-8
Collate: 'Read_Data.R' 'DataProcessing.R' 'DistStatis-Class.R'
        'LinkData.R' 'CompromisePlot.R' 'VarSelection.R' 'GlobalPlot.R'
        'CorrelationPlot.R' 'VarSelection-Class.R' 'Auxiliares.R'
        'ComputeDistance.R' 'dAB.R' 'OTU2Taxa.R'
LazyData: true
NeedsCompilation: no
Roxygen: list(wrap=FALSE)
RoxygenNote: 6.1.1
Config/pak/sysreqs: cmake make libicu-dev libssl-dev libx11-dev
        zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:55:08 UTC
RemoteUrl: https://github.com/bioc/LinkHD
RemoteRef: RELEASE_3_22
RemoteSha: ad5025eb0ed98738f0c2ff4324e45f3bdc52f785
Packaged: 2025-11-11 20:21:29 UTC; root
Built: R 4.5.2; ; 2025-11-11 20:23:37 UTC; windows
