Package: KEGGlincs
Type: Package
Title: Visualize all edges within a KEGG pathway and overlay LINCS data
Version: 1.36.0
Date: 2016-06-02
Author: Shana White
Maintainer: Shana White <vandersm@mail.uc.edu>, Mario Medvedovic
 <medvedm@ucmail.uc.edu>
Description: See what is going on 'under the hood' of KEGG pathways by
        explicitly re-creating the pathway maps from information
        obtained from KGML files.
License: GPL-3
RoxygenNote: 6.1.1
Depends: R (>= 3.3), KOdata, hgu133a.db, org.Hs.eg.db (>= 3.3.0)
SystemRequirements: Cytoscape (>= 3.3.0), Java (>= 8)
Suggests: BiocManager (>= 1.20.3), knitr, graph
biocViews: NetworkInference, GeneExpression, DataRepresentation,
        ThirdPartyClient,CellBiology,GraphAndNetwork,Pathways,KEGG,Network
Imports:
        AnnotationDbi,KEGGgraph,igraph,plyr,gtools,httr,RJSONIO,KEGGREST,
        methods,graphics,stats,utils, XML, grDevices
VignetteBuilder: knitr
Config/pak/sysreqs: libglpk-dev make default-jdk libpng-dev libxml2-dev
        libssl-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:34:49 UTC
RemoteUrl: https://github.com/bioc/KEGGlincs
RemoteRef: RELEASE_3_22
RemoteSha: d01fd07a95cc2503e532579839fa0febdbee55e1
NeedsCompilation: no
Packaged: 2025-11-11 20:15:50 UTC; root
Built: R 4.5.2; ; 2025-11-12 03:18:16 UTC; windows
