Package: CellMixS
Type: Package
Title: Evaluate Cellspecific Mixing
Version: 1.26.0
Authors@R: c(person("Almut", "Lütge", role = c("aut", "cre"), email = "almut.lue@gmail.com"))
Description: CellMixS provides metrics and functions to evaluate batch
        effects, data integration and batch effect correction in single
        cell trancriptome data with single cell resolution. Results can
        be visualized and summarised on different levels, e.g. on cell,
        celltype or dataset level.
License: GPL (>=2)
Imports: BiocNeighbors, ggplot2, scater, viridis, cowplot,
        SummarizedExperiment, SingleCellExperiment, tidyr, magrittr,
        dplyr, ggridges, stats, purrr, methods, BiocParallel,
        BiocGenerics
Depends: kSamples, R (>= 4.0)
biocViews: SingleCell, Transcriptomics, GeneExpression, BatchEffect
BugReports: https://github.com/almutlue/CellMixS/issues
URL: https://github.com/almutlue/CellMixS
Encoding: UTF-8
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, testthat, limma, Rtsne
Config/pak/sysreqs: libcairo2-dev libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libharfbuzz-dev libicu-dev libjpeg-dev
        libpng-dev libtiff-dev libwebp-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:51:12 UTC
RemoteUrl: https://github.com/bioc/CellMixS
RemoteRef: RELEASE_3_22
RemoteSha: 9f46a58203bc649dd9934f2648cb03b7f0f8d042
NeedsCompilation: no
Packaged: 2025-11-11 14:23:32 UTC; root
Author: Almut Lütge [aut, cre]
Maintainer: Almut Lütge <almut.lue@gmail.com>
Built: R 4.5.2; ; 2025-11-11 14:28:17 UTC; windows
