Package: ncGTW
Type: Package
Title: Alignment of LC-MS Profiles by Neighbor-wise Compound-specific
        Graphical Time Warping with Misalignment Detection
Version: 1.24.0
Author: Chiung-Ting Wu <ctwu@vt.edu>
Maintainer: Chiung-Ting Wu <ctwu@vt.edu>
biocViews: Software, MassSpectrometry, Metabolomics, Alignment
Description: The purpose of ncGTW is to help XCMS for LC-MS data
        alignment. Currently, ncGTW can detect the misaligned feature
        groups by XCMS, and the user can choose to realign these
        feature groups by ncGTW or not.
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.1.1
LinkingTo: Rcpp
Suggests: BiocStyle, knitr, testthat, rmarkdown
VignetteBuilder: knitr
Depends: methods, BiocParallel, xcms
Imports: Rcpp, grDevices, graphics, stats
BugReports: https://github.com/ChiungTingWu/ncGTW/issues
Config/pak/sysreqs: libglpk-dev make libicu-dev libxml2-dev
        libnetcdf-dev libssl-dev zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:53:19 UTC
RemoteUrl: https://github.com/bioc/ncGTW
RemoteRef: RELEASE_3_22
RemoteSha: 2eb1b4f2328de86a57f03bc8016b44962c2dc80e
NeedsCompilation: yes
Packaged: 2026-01-08 08:48:15 UTC; root
Built: R 4.5.2; x86_64-apple-darwin20; 2026-01-08 08:52:55 UTC; unix
