Package: ACE
Title: Absolute Copy Number Estimation from Low-coverage Whole Genome
        Sequencing
Description: Uses segmented copy number data to estimate tumor cell percentage 
    and produce copy number plots displaying absolute copy numbers.
Version: 1.28.0
Author: Jos B Poell
Maintainer: Jos B Poell <j.poell@amsterdamumc.nl>
Depends: R (>= 3.4)
Imports: Biobase, QDNAseq, ggplot2, grid, stats, utils, methods,
        grDevices, GenomicRanges
biocViews: CopyNumberVariation, DNASeq, Coverage, WholeGenome,
        Visualization, Sequencing
License: GPL-2
Encoding: UTF-8
LazyData: true
URL: https://github.com/tgac-vumc/ACE
RoxygenNote: 6.1.1
Suggests: knitr, rmarkdown, BiocStyle
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2025-10-30 02:42:11 UTC; biocbuild
git_url: https://git.bioconductor.org/packages/ACE
git_branch: RELEASE_3_22
git_last_commit: 1cb1960
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.22
Date/Publication: 2025-10-29
Built: R 4.5.1; ; 2025-10-30 12:03:22 UTC; unix
