Extract and aggregate genomic coverage over features of interest
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Documentation for package ‘tidyCoverage’ version 1.3.0
Help Pages
| ac | Example 'CoverageExperiment' and 'AggregatedCoverage' objects |
| aggregate-method | aggregate |
| AggregatedCoverage | aggregate |
| as_tibble-methods | as_tibble |
| as_tibble.AggregatedCoverage | as_tibble |
| ce | Example 'CoverageExperiment' and 'AggregatedCoverage' objects |
| coarsen | CoverageExperiment |
| coarsen-method | CoverageExperiment |
| CoverageExperiment | CoverageExperiment |
| CoverageExperiment-method | CoverageExperiment |
| data | Example 'CoverageExperiment' and 'AggregatedCoverage' objects |
| expand,CoverageExperiment | Expand a CoverageExperiment object |
| expand-method | Expand a CoverageExperiment object |
| expand.CoverageExperiment | Expand a CoverageExperiment object |
| geom_aggrcoverage | Plotting functions |
| geom_coverage | Plotting functions |
| ggplot-tidyCoverage | Plotting functions |
| print.AggregatedCoverage | show |
| print.CoverageExperiment | show |
| scale_x_genome | Plotting functions |
| scale_y_coverage | Plotting functions |
| show | show |
| show-method | show |
| tbl_format_header.tidyAggregatedCoverage | show |
| tbl_format_header.tidyCoverageExperiment | show |