Speedy quality assurance via lasso labeling for LC-MS data

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Documentation for package ‘squallms’ version 1.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

extractChromMetrics	Extract metrics of chromatographic peak quality
labelFeatsLasso	Label similar chromatographic features in bulk via interactive selection
labelFeatsManual	Label chromatographic features manually one at a time via interactive interface
logModelFeatProb	Model feature quality using a logistic regression
logModelFeatQuality	Turn 0-1 likelihood values into categorical (good/bad) classifications
makeXcmsObjFlat	Make an XCMS object flat
pickyPCA	Perform a PCA on multi-file chromatographic data
updateXcmsObjFeats	Update features in an XCMS object