Genomic trajectories with heterogeneous genetic and environmental backgrounds

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Documentation for package ‘phenopath’ version 1.31.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

clvm	Fit a CLVM Model
interactions	Tidy summary of interactions
interaction_effects	Get the interaction effect sizes
interaction_sds	Get the interaction standard deviations
phenopath	PhenoPath - genomic trajectories with heterogeneous backgrounds
plot_elbo	Plots the ELBO
print.phenopath_fit	Print a PhenoPath fit
significant_interactions	Significance testing for interaction features
simulate_phenopath	Simulate from phenopath model
trajectory	Get the latent PhenoPath trajectory