Loading and annotation RNA-seq counts matrices


[Up] [Top]

Documentation for package ‘phantasusLite’ version 1.5.0

Help Pages

getHSDSFileList Returns list of all HDF5-files on HSDS-server
inferCondition Adds condition to the annotation.
loadCountsFromH5FileHSDS Load count matrix from remote HDF5-file
loadCountsFromHSDS Load count matrix from HDF5-files.
readGct Reads ExpressionSet from a GCT file.
writeGct Saves ExpressionSet to a GCT file (version 1.3).