data1 |
A proteomics dataset with random protein expression values - no missing values. |
data2 |
A small dataset with 50 proteins and 30 samples for the example usage of RolDE |
data3 |
A semi-simulated UPS1 spike-in dataset with differences in longitudinal expression for the spike-in proteins - no missing values. |
des_matrix1 |
A RolDE design matrix for data1 |
des_matrix2 |
A RolDE design matrix for data2 |
des_matrix3 |
A RolDE design matrix for data3 |
plotFindings |
Plot RolDE results |
res1 |
RolDE results for data1 |
res3 |
RolDE results for data3 |
RolDE |
Robust longitudinal Differential Expression |
RolDE_Main |
Robust longitudinal Differential Expression |