KinSwingR: network-based kinase activity prediction
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Documentation for package ‘KinSwingR’ version 1.25.0
Help Pages
| KinSwingR-package | KinSwingR: A package for predicting kinase activity |
| buildPWM | Generate Position Weight Matrices (PWMs) |
| cleanAnnotation | Function for extracting peptide sequences from multimapped or complex annotated data |
| example_phosphoproteome | Example phosphoproteome. |
| KinSwingR | KinSwingR: A package for predicting kinase activity |
| phosphositeplus_human | Human kinase-substrates derived from PhosphositePlus. |
| scoreSequences | Score substrate sequences for matches to kinase Position Weight Matrices (PWMs) |
| swing | Swing statistic |
| viewPWM | View motif |