KinSwingR: network-based kinase activity prediction


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Documentation for package ‘KinSwingR’ version 1.25.0

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KinSwingR-package KinSwingR: A package for predicting kinase activity
buildPWM Generate Position Weight Matrices (PWMs)
cleanAnnotation Function for extracting peptide sequences from multimapped or complex annotated data
example_phosphoproteome Example phosphoproteome.
KinSwingR KinSwingR: A package for predicting kinase activity
phosphositeplus_human Human kinase-substrates derived from PhosphositePlus.
scoreSequences Score substrate sequences for matches to kinase Position Weight Matrices (PWMs)
swing Swing statistic
viewPWM View motif