RegioneReloaded: Multiple Association for Genomic Region Sets
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Documentation for package ‘regioneReloaded’ version 1.9.0
Help Pages
| AlienGenome | AlienGenome |
| AlienRSList_broad | AlienRSList_broad |
| AlienRSList_narrow | AlienRSList_narrow |
| chooseHclustMet | chooseHclustMet |
| createUniverse | createUniverse |
| crosswisePermTest | crosswisePermTest |
| cw_Alien | cw_Alien |
| cw_Alien_RaR | cw_Alien_RaR |
| cw_Alien_ReG | cw_Alien_ReG |
| cw_Alien_ReG_no_Square | cw_Alien_ReG_no_Square |
| cw_Alien_ReR | cw_Alien_ReR |
| genoMatriXeR-class | genoMatriXeR Class |
| getHClust | getHClust |
| getMatrix | Get Matrix |
| getMultiEvaluation | getMultiEvaluation |
| getParameters | getParameters |
| gMXR | genoMatriXeR Class |
| makeCrosswiseMatrix | makeCrosswiseMatrix |
| makeLZMatrix | Make Local Z-Score Matrix |
| mLZS | multiLocalZScore Class |
| mLZ_regA_ReG | mLZ_regA_ReG |
| mLZ_regA_ReG_br | mLZ_regA_ReG_br |
| mLZ_regD_ReG | mLZ_regD_ReG |
| multiLocalZscore | multiLocalZscore |
| multiLocalZScore-class | multiLocalZScore Class |
| plotCrosswiseDimRed | plotCrosswiseDimRed |
| plotCrosswiseMatrix | plotCrosswiseMatrix |
| plotLocalZScoreMatrix | Plot Local Z-Score Matrix |
| plotSingleLZ | plotSingleLZ |
| plotSinglePT | plotSinglePT |
| randomizeRegionsPerc | randomizeRegionsPerc |
| similarRegionSet | similar RegionSets |