Visualization Tool for GWAS Result

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Documentation for package ‘ggmanh’ version 1.11.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

binned_manhattan_plot	Plot Binned Manhattan Plot
binned_manhattan_plot-method	Plot Binned Manhattan Plot
binned_manhattan_plot.data.frame	Plot Binned Manhattan Plot
binned_manhattan_plot.default	Plot Binned Manhattan Plot
binned_manhattan_plot.MPdataBinned	Plot Binned Manhattan Plot
binned_manhattan_preprocess	Preprocess GWAS Result for Binned Manhattan Plot
binned_manhattan_preprocess-method	Preprocess GWAS Result for Binned Manhattan Plot
binned_manhattan_preprocess.data.frame	Preprocess GWAS Result for Binned Manhattan Plot
binned_manhattan_preprocess.default	Preprocess GWAS Result for Binned Manhattan Plot
binned_manhattan_preprocess.MPdata	Preprocess GWAS Result for Binned Manhattan Plot
calc_new_pos	Calculate new x-position of each point
default_gds_path	Path to Default GDS File
gds_annotate	Annotation with GDS File
ggmanh	ggmanh: A package for visualization of GWAS results.
ggmanh_annotation_gds	gnomAD Variant Annotation in SeqArray Format
manhattan_data_preprocess	Preprocess GWAS Result
manhattan_data_preprocess-method	Preprocess GWAS Result
manhattan_data_preprocess.data.frame	Preprocess GWAS Result
manhattan_data_preprocess.default	Preprocess GWAS Result
manhattan_plot	Manhattan Plotting
manhattan_plot-method	Manhattan Plotting
manhattan_plot.data.frame	Manhattan Plotting
manhattan_plot.default	Manhattan Plotting
manhattan_plot.MPdata	Manhattan Plotting
qqunif	Plot Quantile-Quantile Plot of p-values against uniform distribution.
thinPoints	Thin Data Points