Sequence logos for DNA sequence alignments

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Documentation for package ‘seqLogo’ version 1.72.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

alphabet	An S4 class to represent a PWM matrix.
consensus	An S4 class to represent a PWM matrix.
consensus-method	An S4 class to represent a PWM matrix.
ic	An S4 class to represent a PWM matrix.
ic-method	An S4 class to represent a PWM matrix.
makePWM	Constructing a pwm object
plot-method	An S4 class to represent a PWM matrix.
pwm	An S4 class to represent a PWM matrix.
pwm-class	An S4 class to represent a PWM matrix.
pwm-method	An S4 class to represent a PWM matrix.
seqLogo	Plot a sequence logo for a given position weight matrix
show-method	An S4 class to represent a PWM matrix.
summary-method	An S4 class to represent a PWM matrix.